Table 1 Probe sequence for four SNPs used for Taqman fluorescence probe analysis
SNP | Rs number | Chromosome | Functional consequence | Position | Probe sequence |
|---|---|---|---|---|---|
C1341T | rs3856806 | 3 | Intron variant | 12,415,557 | 5′-GGTTGACACAGAGATGCCATTCTGG[C/G] CCACCAACTTTGGGATCAGCTCCGT-3′ |
Intron A>G | rs709158 | 3 | Intron variant | 12,403,176 | 5′-AGATACGGGGGAGGAAATTCACTGG[A/G] TTTTACAATATATTTTTCAAGGCAA-3′ |
Pro12Ala | rs1805192 | 3 | Missense | 12,361,238 | 5′-ACCTCAGACAGATTGTCACGGAACA[C/T] GTGCAGCTACTGCAGGTGATCAAGA-3′ |
Intron C>T | rs4684847 | 3 | Intron variant | 12,326,337 | 5′-ATTTATTTAAATCATCTCTAATTCT[C/T] ACAACTCCGAAAAGATAAGAAAACA-3′ |