Skip to main content

Table 2 Haplotype and diplotype patterns and frequencies for TOMM20

From: Methylation quantitative trait loci within the TOMM20 gene are associated with metabolic syndrome-related lipid alterations in severely obese subjects

Haplotypes (H)

rs4567344 (A > G)

rs11301 (T > C)

rs4551650 (G > A)

rs17523127 (G > C)

Frequency (%)

H1

0

0

1

1

25.3

H2

1

0

1

1

10.1

H3

1

1

1

1

35.1

H4

1

1

0

0

29.5

Diplotypes

 H1/H1

0/0

0/0

1/1

1/1

6.6

 H1/H2

0/1

0/0

1/1

1/1

5.1

 H1/H3

0/1

0/1

1/1

1/1

18.0

 H1/H4

0/1

0/1

1/0

1/0

14.4

 H2/H2

1/1

0/0

1/1

1/1

0.7

 H2/H3

1/1

0/1

1/1

1/1

7.2

 H2/H4

1/1

0/1

1/0

1/0

6.3

 H3/H3a

1/1

1/1

1/1

1/1

12.0

 H3/H4

1/1

1/1

1/0

1/0

21.2

 H4/H4

1/1

1/1

0/0

0/0

8.6

  1. Numbers 1 and 0 indicate common and rare allele, respectively
  2. aThe reference diplotype